What is “Gut-Health”?
- No clear definition. But it is a combination of stuff including:
- 1) The ratio/diversity of bacteria in the gut. But even this is not super clear cut.
- 2) GI symptoms – good gut health = lack of GI symptoms
- But there is disconnect e.g. eating highly fermentable foods can be great for the good bacteria, but bad for the symptoms in some cases.

How Do We Measure it?
- Measuring the abundance of “good types of bacteria.” Measuring the abundance of “pathogenic bacteria.” Measuring the diversity of bacteria. Monitoring GI symptoms.
- The bacteria side of things is often measured in stool samples.
How Do We Define a High Protein Diet?
- A diet that is >25% of calories from protein (above the AMDR). Another one could be >1.4g/kg/day or a similar type of number)
What Changes are Reportedly Seen on a High Protein Diet?
- Decrease in the bacteria that produce short chain fatty acids
- Reduction in diversity of microbiome

What Relevant Research is there on the Topic?
The Korean Study
- A study published in 2019 compared faecal microbiota characteristics amongst bodybuilders, distance runners and a control group of sedentary men.
- They assessed the relationship between the gut microbiome and body composition, athlete type and dietary intake.
- Amongst bodybuilders there was a general reduction in bacteria that produced short-chain fatty acids. These are well-known for their positive role in gut health.
- It was suggest that this was for a couple of key differences that were apparent between the bodybuilders and the other groups –
- A) they had the highest protein intake (236g VS 103g in runners & 70g in control)
- B) Their protein to carb ratio was double the other groups as well which could be a factor
- C) Whilst they had the highest fibre intake by a few gram on average, the mean intake was only 19g per day – it was suggested that such a high protein intake in combination with a subpar fibre intake, may be the biggest issue when it comes to these high protein diets and gut health

- A study by Clarke et al. From 2014 looked at protein intake and gut microbiome diversity in rugby players
- They found that as protein intake in rugby athletes increased, the gut microbiota diversity actually increased! So a higher protein intake does not always have to have a negative impact on gut health.
- The biggest difference between the diet of the rugby athletes and the bodybuilders and runners in the Korean study was that the Rugby athletes had a higher carbohydrate and fibre intake. Likely protecting them from the potential effects of a high protein diet.
Can We Offset these Changes in Any Way?
- High fibre diet. A solid target to make sure it scales with higher calorie intakes is at least 12-15g of fibre per 1000kcal.
- Diversity of plant based foods
- Keeping fat intake <40% of total calories. Keep saturated fat <10%.
- Limit high fat red meat and processed meat – high fat/cholesterol intake from meat is linked with lower bifidobacteria levels
Summary – Are High Protein Diets Bad for Gut Health?
- The health effects of increased protein fermentation are not entirely clear. But high protein, low carbohydrate and fibre diets are likely harmful to the gut microbiome.
- For those who are on a high protein diet, for long-term gut health, there should at least be a focus on adequate fibre, a higher carbohydrate diet & high plant food diversity.
Relevant Links/ Resources
Studies Mentioned:
- The Korean Study – Sport-Specific Diets and the Gut Microbiome
- Exercise & Diet Extremes Impact on Gut Health
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